Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909633.1_cds_XP_016459806.1_53295
CDS Infomation

[gene=LOC107783351] [db_xref=GeneID:107783351] [protein=calcium-dependent protein kinase 13] [protein_id=XP_016459806.1] [location=join(70851..71481,74694..74837,74950..75102,76279..76394,76480..76647,77464..77694,77786..77935)] [gbkey=CDS]
Sequence

ATGGGGAACTGCTGCAGATCTCCGGCAGCTGTCGCAAGAGAAGACGTGAAGTCTTCAAAC
TTCTCCGGCAACGATCACGGCCGGAAAGACAAGTCCGGCGCCGCAAAATCTCAAAAACCG
GTAACCGTGTTAACCGATGTGAAAAATTCGAACGTTGAAGAGAAGTATTTAGTTGATAGA
GAACTAGGCAGGGGCGAATTCGGAATTACATACCTTTGTATAGATCGTAACAGTAAAGAG
CTTTTAGCTTGCAAGTCAATTTCGAAACGGAAGCTACGAACAGCTGTAGATGTGGAGGAT
GTGAGGAGAGAAGTAGCTATAATGAAGCATTTGCCGGTGAATTCAAATATTGTGAGCTTT
AGAGAAGCGTGCGAGGATGAAAATGCGGTGCATTTGGTTATGGAATTGTGCGAAGGTGGG
GAATTGTTCGATAGGATTGTGGCGCGAGGACATTATACTGAACGAGCTGCGGCTGCTGTT
ACACGGACGATTATGGAGGTTGTGATGCTTTGTCATAAGCATGGTGTGATTCATAGAGAT
TTGAAACCTGAGAACTTTTTGTTTGCTAATAAGAAGGAAAATTCGCCTCTTAAAGCTATT
GATTTTGGCTTGTCAATTTTCTTCAAGCCAGGGGAGAGTTTCTCTGAAATAGTCGGAAGT
CCCTATTATATGGCTCCTGAGGTGCTCAAACGAAACTATGGACCAGAGATAGATATATGG
AGTGCAGGAGTCATTTTATACATTTTGTTATGTGGGGTTCCTCCTTTTTGGGCTGAATCT
GAACAAGGTGTTGCTCAGGCCATCTTACGTGGGGCGATAGATTTCAAACGGGAACCCTGG
CCAAGTATTTCAGAGAGTGCTAAAAATCTTGTACGGCAAATGCTGGAGCCAGATCCAAAG
CTTCGGCTGACTGCAAAACAAGTACTTGAACACTCTTGGCTTCAAAATGCTAAGAAGGCT
CCAAATGTTCCCCTTGGAGATGTTGTGAAGTCAAGACTTAAGCAATTTTCTTTGATGAAT
AGGTTTAAGAGGAAAGCTCTGAGGGTGATTGCTGATTTCTTGTCTAATGAAGAAGTTGAA
GACCTCAGAGAAATGTTTAGCAAGATAGACACCGATAATGATGGTATTGTTTCAGTCCAA
GAACTTAAAGCTGGACTTCCAAAGCTCAACTCACAGCTGGCAGAATCTGAAGTACAAATG
CTTGTTGAAGCCATTGATACCAATGGCAAAGGGACCCTGGACTATGGGGAATTTATTGCT
GTTTCACTCCATCTTCAACGGATGGCTAACGATGAACATCTGCACAAGGCTTTCTCCTAC
TTTGATAAGGATGGAAATGGTTACATTGAACCAGATGAGCTTCGAGATGCCTTGATGGAG
GATGGGGCAGATGACTGCGCCAATGTGGCGAATGACATTTTCCAGGAGGTTGATACAGAC
AAGGATGGGCGCATCAGCTTTGAAGAATTTGCGGCCATGATGAAAACTGGGACAGATTGG
AGAAAGGCTTCACGACATTATTCAAGAGGGAGATTTAATAGTCTAAGTGTGAAGCTAATG
AAGGATGGTTCGCTTAACTTGGGAAATGAGTAA

Peptide Sequence

PEP ID

XP_016459806.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 13 [Nicotiana tabacum]
Sequence

MGNCCRSPAAVAREDVKSSNFSGNDHGRKDKSGAAKSQKPVTVLTDVKNSNVEEKYLVDR
ELGRGEFGITYLCIDRNSKELLACKSISKRKLRTAVDVEDVRREVAIMKHLPVNSNIVSF
REACEDENAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIMEVVMLCHKHGVIHRD
LKPENFLFANKKENSPLKAIDFGLSIFFKPGESFSEIVGSPYYMAPEVLKRNYGPEIDIW
SAGVILYILLCGVPPFWAESEQGVAQAILRGAIDFKREPWPSISESAKNLVRQMLEPDPK
LRLTAKQVLEHSWLQNAKKAPNVPLGDVVKSRLKQFSLMNRFKRKALRVIADFLSNEEVE
DLREMFSKIDTDNDGIVSVQELKAGLPKLNSQLAESEVQMLVEAIDTNGKGTLDYGEFIA
VSLHLQRMANDEHLHKAFSYFDKDGNGYIEPDELRDALMEDGADDCANVANDIFQEVDTD
KDGRISFEEFAAMMKTGTDWRKASRHYSRGRFNSLSVKLMKDGSLNLGNE

Transcript Sequence

Gene sequence data has not been registered.